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beta 8

Release Notices for Cactus 4.0 beta 8
=====================================
Date: 28th July 2000

Released modules:
================
Cactus
CactusBase
CactusBench
CactusEinstein
CactusElliptic
CactusExamples
CactusPUGH
CactusPUGHIO
CactusTest
CactusWave
external

New thorns:
==========
CactusPUGH/PUGHSlab
CactusBase/IOASCII
CactusWave/WaveBinarySource

Removed thorns:
==============
CactusPUGHIO/IOASCII
CactusWave/IDBinarySource
CactusNet/*

New supported architectures
===========================
Solaris
Intel IA64
Hitachi SR8000-F1 (partial)

CVS Tag: Cactus_4_0_Beta_8
=======


==============================================================================


CHANGES FOR BETA 8
==================

Infrastructure
==============

Flesh
=====

1) Calling Fortran routines
FMODIFIER is deprecated (removed in beta 9)
FMODIFIER -> CCTK_FCALL
FORTRAN_NAME is deprecated (removed in beta 9)
FORTRAN_NAME -> CCTK_FNAME

2) Fixed bug in CCTK_SyncGroups which could have affected anyone
synchronising from the scheduler

3) Added new function

CCTK_CreateDirectory(pathname, mode)

which creates a new directory (including any parent directories
needed). This function replaces CCTK_mkdir, which will be removed
in beta 9. This new function doesn't use the 'system' call, so
has resolved a long-standing problem with the myrinet libraries.

4) Some routine name changes and extra arguements added (needed for
handling coordinate systems for different dimensions). Now as well
as registering coordinate names, coordinate systems are also registered.
See the Users Guide for details of the new routines.

Removed routines

CCTK_RegisterCoordI
CCTK_CoordOrigin
CCTK_RegisterCoord
CCTK_RegisterCoordRange

New routines/Changed argument lists

CCTK_CoordRegisterRange
CCTK_CoordRange
CCTK_CoordSystemDim
CCTK_CoordDir
CCTK_CoordIndex
CCTK_CoordRegisterData

Be warned, these could change again slightly, as we realise what
the coordinate functions have to be capable of handling.

5) Changed names of interpolation calls to fit standard notation

CCTK_GetInterpHandle -> CCTK_InterpHandle
CCTK_RegisterInterpOperator -> CCTK_InterpRegisterOperator

Old names will be removed in beta 9

6) Removed deprecated include files

cctk_arguments.h -> cctk_Arguments.h
cctk_parameters.h -> cctk_Parameters.h

7) Arguments changed to exit calls

CCTK_Exit(int retval, cctkGH *GH) -> CCTK_Exit(cctkGH *GH, int retval)
CCTK_Abort(cctkGH *GH) -> CCTK_Abort(cctkGH *GH, int retval)

The first change is just for consistency, the second because MPI_Abort
takes an exit code. Driver thorn writers should change any overloaded
functions.

8) Building include files

The notation for building include files has changed, to make a distinction
between executable source code and header files. This is so that
executable source code can be wrapped by a call to CCTK_IsThornActive.
See the documentation for details. The old notation will still work
but will be removed in Beta 9.

9) Reduction operators

Registered reduction operators should now return an int, rather than a void.

10) The GNU regex and getopt libraries are only compiled if they, or the
equivalent, are not available on the system already. This solved a
long-standing bug when compiling with the Portland C compiler.

Util Thorns
===========

1) CactusBase/CartGrid3D

Removed deprecated routines:

SetCartSymmetry
SetCartSymVN
CartSymBCGroupI
CartSymBCVar
CartSymBCVarI
CartSymBCGroup
SetCartSymBCVar
CartSymBCGroup
ApplySymmetry
RadiativeBCVar
RadiativeBCVarI
RadiativeBCGroup
RadiativeBCGroupI


Replaced by:

SetCartSymGN
SetCartSymGI
SetCartSymVN
SetCartSymVI
CartSymGN
CartSymGI
CartSymVN
CartSymVI

Note that all the Fortran calls now have an integer error code as the
first argument

2) CactusPUGH/PUGHSlab: This is a new thorn which returns data from a
hyperslab of a given grid function. This functionality makes writing
IO thorns a lot easier, and will give them much more functionality.

3) CactusBase/IOASCII: CactusPUGHIO/IOASCII now make use of thorn
PUGHSlab to obtain it's data, this means that it no longer makes
use of PUGH, and so has moved arrangements. To compile
CactusBase/IOASCII you should have CactusPUGH/PUGHSlab (or any other
implementation of hyperslab) in your active thorns list.

4) CactusBase/Boundary:

The following functions are deprecated, and will be removed in beta 9

ConstantBCVar
ConstantBCVarI
ConstantBCGroup
ConstantBCGroupI
ApplyConstantBC
CopyBCGroup
CopyBCGroupI
CopyBCVar
CopyBCVarI
FlatBCGroupI
FlatBCGroup
FlatBCVarI
FlatBCVar

the routines for applying constant boundary conditions now follow
the standard notation

BndScalarVI (by variable index)
BndScalarVN (by variable name)
BndScalarGI (by group index)
BndScalarGN (by group name)

BndCopyVI
BndCopyVN
BndCopyGI
BndCopyGN

BndRadiativeVI
BndRadiativeVN
BndRadiativeGI
BndRadiativeGN

BndFlatVI
BndFlatVN
BndFlatGI
BndFlatGN

5) CactusBase/IOASCII:

Now can do 2D output of ASCII data from 3D grid functions

6) CactusBase/IOUtil, CactusBase/IOASCII, CactusBase/IOFlexIO

Changed and added parameters for the way that 1D and 2D slices are
selected for output. The symmetry parameters (e.g. octant) from CartGrid3D
are no longer used, instead there are now parameters for specifying
the slice by a physical coordinate or by a grid index. These parameters
default to the parameters in IOUtil, but can be overriden by parameters
for the individual methods. The order of choosing the data by parameters
in the parameter file is

* if an index is set for a method that is used or
* if an index is set for IOUtil that is used or
* if a coordinate value is set for a method that is used or
* if a coordinate value is set for IOUtil that is used

if nothing is set in the parameter file you get the same output as
before EXCEPT for a full grid the lines/planes will move to index 0
rather than being at the center of the grid.

7) CactusBase/IOUtil

The utility routine to parse variable names in a parameter file string
for IO is now called

IOUtil_ParseVarsForOutput

changed from ParseVarsForOutput

8) CactusWave/WaveBinarySource

New thorn which evolves orbiting scalar sources, this is useful since
it provides a constant wave stream for testing.

9) CactusTest: New Arrangement

Thorns for testing different parts of the Cactus infrastructure

10) CactusExamples: New Arrangement

Example applications ... the WaveToy example in 1D and 2D, defining
coordinates etc.

11) CactusNet

This is still available, but due to the very active development of the
thorns in this arrangement we decided to not include it in the set of
tested thorns for this release.

==============================================================================


KNOWN BUGS IN BETA 8
====================
(See Cactus bug tracking system for a complete list)

1) Output for DISTRIB=CONSTANT arrays isn't supported yet.
2) Deletion of a thorn which was in the ThornList of a
configuration requires the user to manually delete
make.thornlist in <config>/config-data
3) No warning for unreachable schedule points.
4) Activation doesn't check that all parent and friend
implementations are activated.

==============================================================================


WHAT TO EXPECT IN BETA 9
========================

1) More sophisticated method to incorporate external libraries
2) Function aliasing
3) Directional syncing policies in the schedule.ccl
4) gmake bugreport, gmake <config>-bugreport

... and, as normal, more documentation and bug fixes.

==============================================================================


TEST MACHINES NOTES
===================

* Intel IA32 (Linux Redhat 6.2)
o bifrost.aei-potsdam.mpg.de w/wo MPICH (p4 and shmem devices)

Fortran compiler: Portland, Absoft F90
- not compiling:
CactusElliptic/EllPETSc (compiles with MPI)

Fortran compiler: Vast F90
- not compiling:
CactusElliptic/EllPETSc (compiles with MPI)
CactusEinstein/AHFinder

Fortran compiler: g77 F77
- not compiling:
CactusBench/BenchADM
CactusEinstein/ADM
CactusEinstein/ADMConstraints
CactusEinstein/AHFinder
CactusEinstein/Extract
CactusEinstein/IDAxiBrillBH
CactusEinstein/IDBrillData
CactusEinstein/IDLinearWaves
CactusEinstein/PsiKadelia
CactusEinstein/TimeGeodesic
CactusElliptic/EllPETSc
CactusElliptic/EllSOR
CactusElliptic/EllTest
CactusPUGH/Interp
CactusTest/TestArrays
CactusTest/TestCoordinates
CactusTest/TestInclude1
CactusTest/TestInclude2
CactusTest/TestComplex
CactusTest/TestInterp
CactusWave/WaveToyF90
CactusWave/WaveToyFreeF90


* Intel IA32 Cluster (Linux Redhat 6.2)
o roadrunner.alliance.unm.edu w/wo MPICH (gm device)
- not compiling:
CactusElliptic/EllPETSc (should work)
CactusPUGHIO/IOHDF5 (HDF5 not installed)


* Cray T3E (Unicos mk2.0.5.X)
o berte.zib.de w/wo native MPI
- not compiling:
CactusElliptic/EllPETSc (PETSc not installed)
CactusPUGHIO/IsoSurfacer
external/RemoteIO
external/TCPXX
- failing testsuite
CactusEinstein/IDAxiBrillBH


* Dec Alpha (osf4.0f, gcc 2.95.2)
o jalapeno.cactuscode.org w/wo MPICH (shmem and p4 devices)
- not compiling:
CactusElliptic/EllPETSc (not installed)
external/RemoteIO
external/TCPXX


* HP Exemplar (HPUX 10.01)
We no longer have access to a HP Exemplar for testing


* IBM SP2 (AIX 4.2.0.0)
o quad.mcs.anl.gov w/wo native MPI
- not compiling:
CactusElliptic/EllPETSc (not installed)
CactusPUGHIO/IOHDF5
CactusPUGHIO/IsoSurfacer
CactusWave/WaveToyFreeF90
external/RemoteIO,
external/TCPXX,
- comments:
Free format fortran isn't supported yet

* SGI 64 bit (Irix 6.5)
o origin.aei-potsdam.mpg.de, w/wo native MPI
- not compiling:
CactusElliptic/EllPETSc (compiles with MPI)


* SGI 32 bit (Irix 6.5)
o nott.aei-potsdam.mpg.de wo MPI
- not compiling
CactusElliptic/EllPETSc (not installed)
CactusPUGHIO/IOHDF5 (not installed)


* Intel IA64 (TurboLinux Frontier 2.3.99-pre6-000501-18)
o SGI gcc and f90 crosscompiler wo MPI
- not compiling
CactusElliptic/EllPETSc (PETSc not installed)
CactusPUGHIO/IOHDF5 (HDF5 not installed)
CactusPUGHIO/IsoSurfacer (compiles with native compiler)
external/RemoteIO (compiles with native compiler)
external/TCPXX (compiles with native compiler)


* Intel IA32 (Windows NT 4.0)
o saraband.aei-potsdam.mpg.de (VM) wo MPI
- not compiling
CactusElliptic/EllPETSc (not installed)
CactusPUGHIO/IOHDF5 (not installed)
CactusPUGHIO/IsoSurfacer
external/RemoteIO
external/TCPXX
- failing testsuite
CactusEinstein/ADM
CactusEinstein/AHFinder
CactusExamples/WaveToy2D
CactusPUGHIO/IOFlexIO
- comments:
*** Need to use beta 5 version of IEEEIO ***
> cd arrangements/external/IEEEIO
> cvs update -r Cactus_4_0_Beta_5


* Intel IA32 (Windows NT 4.0)
o ntsc-ts1.ncsa.uiuc.edu w/wo MPI (HPVM)
- not compiling
CactusElliptic/EllPETSc (not installed)
CactusPUGHIO/IOHDF5 (not installed)
CactusPUGHIO/IsoSurfacer
external/RemoteIO
external/TCPXX
- failing testsuite
CactusEinstein/ADM
CactusEinstein/AHFinder
CactusExamples/WaveToy2D
CactusPUGHIO/IOFlexIO
- comments:
*** Need to use beta 5 version of IEEEIO ***
> cd arrangements/external/IEEEIO
> cvs update -r Cactus_4_0_Beta_5
Maybe problems with MPI (but probably just
this machine)


* Sun Sparc II (SunOS 5.7)
o ufer.zib.de (VM) w/wo MPICH (p4 device)
- not compiling
CactusEinstein/IDAxiBrillBH
CactusElliptic/EllPETSc (PETSc not installed)
CactusPUGHIO/IOFlexIO
CactusPUGHIO/IOHDF5 (HDF5 not installed)
CactusPUGHIO/IsoSurfacer
external/IEEEIO
- comments:
need to compile with gmake -k
and no optimisation (for TimeGeodesic)


* Hitachi SR8000-F1 (HI-UX/MPP)
o contact cactusmaint@cactuscode.org for status


Created by jeffd
Last modified 2005-06-06 01:58 PM
 

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